Beast code in Giters

Patrick Hüther's starred repositories

nf-sqldb

SQL support plugin for Nextflow

Language:GroovyApache-2.02400

alphafold

Open source code for AlphaFold.

Language:PythonApache-2.01214900

image-shiny-sample

Sample shiny app for deployment on CLIP

Language:R200

rstudio-server-conda

Run Rstudio Server in a conda environment

Language:ShellMIT22100

proteinnet

Standardized data set for machine learning of protein structure

Language:PythonMIT85100

deepchem

Democratizing Deep-Learning for Drug Discovery, Quantum Chemistry, Materials Science and Biology

Language:PythonMIT530100

enroot

A simple yet powerful tool to turn traditional container/OS images into unprivileged sandboxes.

Language:ShellApache-2.058600

multi-projects

Sandbox for nextflow multi-project in Nextflow.

Language:Nextflow400

noodles

Bioinformatics I/O libraries in Rust

Language:RustMIT46800

pinetime-rust-mynewt

PineTime Smart Watch firmware based on Rust and Apache Mynewt OS

Language:AssemblyApache-2.020800

coreutils

Cross-platform Rust rewrite of the GNU coreutils

Language:RustMIT1730400

nushell

A new type of shell

Language:RustMIT3103800

micromamba-docker

Rapid builds of small Conda-based containers using micromamba.

Language:ShellApache-2.025700

vscode-extensionpack

A VSCode extension pack for nf-core developers.

MIT1100

distroless

🥑 Language focused docker images, minus the operating system.

Language:StarlarkApache-2.01823100

mamba

The Fast Cross-Platform Package Manager

Language:C++BSD-3-Clause658200

gonetics

Go / Golang Bioinformatics Library

Language:GoGPL-3.04000

arrow

Apache Arrow is a multi-language toolbox for accelerated data interchange and in-memory processing

Language:C++Apache-2.01395800

vermin

The smart virtual machines manager. A modern CLI for Vagrant Boxes.

Language:GoApache-2.014300

ScanPlateSeg

Python scripts for detection and alignment of dish in scanned seedling data

Language:PythonGPL-3.0100

gonum

Gonum is a set of numeric libraries for the Go programming language. It contains libraries for matrices, statistics, optimization, and more

Language:GoBSD-3-Clause741300

learngo

❤️ 1000+ Hand-Crafted Go Examples, Exercises, and Quizzes. 🚀 Learn Go by fixing 1000+ tiny programs.

Language:GoNOASSERTION1860500

shiny-deseq2

I wanted to learn R and shiny, so I made a not so shiny deseq2 app

Language:RGPL-3.0100

farge

Click on a pixel on your screen and show its color value

Language:ShellMIT47700

sway-launcher-desktop

TUI Application launcher with Desktop Entry support. Made for SwayWM, but runs anywhere

Language:ShellGPL-3.059300

majortom

NASA SpaceApps 2019 Prototype App - Gamified Satellite Visualization

Language:R800

decarbnow

A map that combines climate activism and climate data

Language:JavaScript600

early-stopping-pytorch

Early stopping for PyTorch

Language:Jupyter NotebookMIT121200

widis-lstm-tools

Tools for working with Long Short-Term Memory (LSTM) networks and sequences in Pytorch

Language:PythonGPL-3.03700

hlatyping

Precision HLA typing from next-generation sequencing data

Language:NextflowMIT5200