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parklab
/
bamsnap
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Issues:
29
Forks:
22
parklab/bamsnap Issues
Works with your test data but not with mine
Updated
4 months ago
Sort and color by tag
Updated
5 months ago
ValueError: y1 must be greater than or equal to y0
Updated
6 months ago
Unclear error when using BAM from Nanopore data
Updated
10 months ago
Comments count
3
PacBio CCS reads support
Updated
10 months ago
Comments count
3
IndexError: string index out of range
Updated
a year ago
Comments count
1
More of a question.
Closed
2 years ago
Cant manage to get working with alternative FASTA
Updated
2 years ago
Comments count
6
Runs into error with genomic region size in megabases
Updated
2 years ago
Comments count
1
Specify custom annotation track?
Updated
2 years ago
Plotting in Jupyter via library API?
Updated
2 years ago
HTML created for multi-sample snaps can't load the snaps
Updated
3 years ago
Comments count
2
Error about reference index
Updated
3 years ago
Comments count
2
bamsnap runs into error when `-process` option is used
Updated
3 years ago
How to `sort by base`?
Updated
3 years ago
Comments count
1
KeyError on RNA-seq data
Updated
3 years ago
Comments count
2
Would you please support mm10?
Updated
3 years ago
Comments count
4
Programatic use
Updated
3 years ago
Bamsnap can't recognize lower case letters in reference genomes
Updated
3 years ago
Disabling .txt and .log output files
Closed
3 years ago
Comments count
1
No html or zip output created with multiple threads
Closed
3 years ago
Comments count
2
reference sequence with lowercase characters
Updated
3 years ago
bioconda
Closed
3 years ago
Comments count
2
How to run with custom reference (es assembly)
Updated
3 years ago
CRAM support?
Closed
4 years ago
Comments count
2
ValueError: MD tag not present
Closed
4 years ago
Comments count
1
Add `-show_soft_clipped` to show soft-clipped part of reads
Closed
4 years ago
Comments count
1
Convert pileup-base retrieval to fetch-based retrieval in DrawReadSet class of drawreadset.py
Closed
4 years ago
Comments count
1
Read color by inter-chromosomal rearrangement
Closed
4 years ago
Comments count
1