Noah Yu Zhang's repositories
machine-learning-notes
My continuously updated Machine Learning, Probabilistic Models and Deep Learning notes and demos (2000+ slides) 我不间断更新的机器学习，概率模型和深度学习的讲义(2000+页)和视频链接
mathematical-python
Introduction to Mathematical Computing with Python and Jupyter
scikit-bio
scikit-bio is an open-source, BSD-licensed, Python package providing data structures, algorithms, and educational resources for bioinformatics.
SIBS_320_Cats
A memorial place for all cats and other companion animals in campuses of SIBS, CAS at No.320, Yueyang Rd and No.300, Fenling Rd, Xuhui, Shanghai
SpliZ_pipeline
Code to calculate the Splicing Z Score (SpliZ) for single cell RNA-seq splicing analysis
statannotations
add statistical significance annotations on seaborn plots. Further development of statannot, with bugfixes, new features, and a different API.
structurework
programs and scripts for molecular structure analysis
WhirlwindTourOfPython
The Jupyter Notebooks behind my OReilly report, "A Whirlwind Tour of Python"
brc-parser_from_sridhar0605
bam-readcount parser
htseq_from_htseq
HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.
openintro-statistics
📚 An open-source textbook written at the college level. OpenIntro also offers a second college-level intro stat textbook and also a high school variant.
RNAStructViz
Visualization, comparison, and analysis of RNA secondary structures via a cross-platform GUI
santosjorge_cufflinks_drawing_figures
Productivity Tools for Plotly + Pandas
SSS-test_from_waltercostamb
Selection on the Secondary Structure-test: a test that detects positive and negative selection from a set of orthologs, either small or long ncRNAs.
StructureFold2
StructureFold2
tomazc_iCount_for_iCLIP
iCount, protein-RNA interaction analytics
VAtools_from_griffthlab
A set of tools to annotate VCF files with expression and readcount data