noahpieta

awosome-bioinformatics

A curated list of resources for learning bioinformatics.

dfply

dplyr-style piping operations for pandas dataframes

diptest

Python/C implementation of Hartigan & Hartigan's dip test, based on Martin Maechler's R package

pymol-open-source

Open-source foundation of the user-sponsored PyMOL molecular visualization system.

awesome-deep-learning

A curated list of awesome Deep Learning tutorials, projects and communities.

awesome-pipeline

A curated list of awesome pipeline toolkits inspired by Awesome Sysadmin

awesome-python-applications

💿 Free software that works great, and also happens to be open-source Python.

bedparse

Python module and CLI tool to perform operations on BED files

BUMHMM

BUM-HMM is a statistical modelling pipeline for interpreting high-throughput RNA structure probing data.

cardelino

Cookbook-for-R-Chinese

:books:Cookbook for R 中文翻译

countToFPKM

Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM)

dcor

Distance correlation and related E-statistics in Python

Deepbinner

a signal-level demultiplexer for Oxford Nanopore reads

figlet

Claudio's FIGlet tree

fuzzywuzzy

Fuzzy String Matching in Python

gap_statistic

Dynamically get the suggested clusters in the data for unsupervised learning.

GFA-spec

Graphical Fragment Assembly (GFA) Format Specification

gfatools

Tools for manipulating sequence graphs in the GFA and rGFA formats

Machine-Learning-with-Python

Practice and tutorial-style notebooks covering wide variety of machine learning techniques

minigraph

Proof-of-concept seq-to-graph mapper and graph generator

MoVRs

Motif set Reduction and Validation (MoVRs) - a workflow for the derivation of genome-wide DNA motif detection and vetting

oneliners

Useful bash one-liners for bioinformatics.

paga

Mapping out the coarse-grained connectivity structures of complex manifolds.

pandas-profiling

Create HTML profiling reports from pandas DataFrame objects

pyemd

Accurate, efficient Earth Mover's Distance for Python (and MATLAB).

reactIDR_from_carushi

Evaluation of the statistical reproducibility of high-throughput structural analyses for a robust RNA reactivity classification

scientific-visualization-book

An open access book on scientific visualization using python and matplotlib

spark-ml-source-analysis

spark ml 算法原理剖析以及具体的源码实现分析

USTC-CS-Courses-Resource

:heart:**科学技术大学计算机学院课程资源(https://mbinary.xyz/ustc-cs/)