neuropil

ml4a

A python library and collection of notebooks for making art with machine learning.

sortingQuality

Functions to assess quality of spike sorting results

cfc_analysis

Detailed characterization of cross frequency coupling in neural data

mnl_seegview

SEEG plotting tools in canonical AC-PC slices

buzcode

Code for internal lab sharing - polishing has started but is by no means complete

Quinn2021_Waveform

Analysis scripts accompanying "Within-cycle instantaneous frequency profiles report oscillatory waveform dynamics" https://doi.org/10.1101/2021.04.12.439547

state_space

jina

☁️ Build multimodal AI applications with cloud-native stack

gradio

Build and share delightful machine learning apps, all in Python. 🌟 Star to support our work!

AugLy

A data augmentations library for audio, image, text, and video.

skweak

skweak: A software toolkit for weak supervision applied to NLP tasks

directionalDBSmodel

Interactive_Tools

Interactive Tools for Machine Learning, Deep Learning and Math

MATLAB-Deep-Learning-Model-Hub

Discover pretrained models for deep learning in MATLAB

R-Network-Visualization-Workshop

Static and dynamic network visualization with R - code and tutorial from Sunbelt 2019 workshop.

scientific-visualization-book

An open access book on scientific visualization using python and matplotlib

doubtlab

Doubt your data, find bad labels.

Quinn2021_Waveform

Analysis scripts accompanying "Within-cycle instantaneous frequency profiles report oscillatory waveform dynamics" https://doi.org/10.1101/2021.04.12.439547

closed_loop_mdd

depthai-experiments

Experimental projects we've done with DepthAI.

connectome-spectral-analysis

Repository for paper https://authors.elsevier.com/sd/article/S1053-8119(21)00884-3

OPSCEA

Software for heatmaps of seizure activity projected onto reconstructed brains (Omni-Planar and Surface Casting of Epileptiform Activity). PAPER: https://doi.org/10.1111/epi.16841, VIDEO EXAMPLES: https://www.youtube.com/playlist?list=PLGmfrsRwdva-WKwqLyWwcZxE0f_MA9vIL

OPSCEA

From the Kleen Lab at UCSF (http://kleen.ucsf.edu). Software for heatmaps of seizure activity projected onto reconstructed brains (Omni-Planar and Surface Casting of Epileptiform Activity). PAPER: https://doi.org/10.1111/epi.16841, VIDEO EXAMPLES: https://www.youtube.com/playlist?list=PLGmfrsRwdva-WKwqLyWwcZxE0f_MA9vIL

WaveMAP_Paper

This repo allows for the complete reproduction, from processed data, of all the main and supplemental figures in the manuscript Non-linear Dimensionality Reduction on Extracellular Waveforms Reveals Physiological, Functional, and Laminar Diversity in Premotor Cortex.

CellExplorer

CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cells acquired using extracellular electrodes.

WaveMAP_Paper

This repo allows for the complete reproduction, from processed data, of all the main and supplemental figures in the manuscript Non-linear Dimensionality Reduction on Extracellular Waveforms Reveals Physiological, Functional, and Laminar Diversity in Premotor Cortex.

volume-labeling-widgets

Enable custom workflows for labeling volumes and isosurfaces in your MATLAB app.

vision_ui

This is a vision-based 3d model manipulation and control UI

depthai

DepthAI Python API utilities, examples, and tutorials.

SmartEEG