John (neuropil)

neuropil

Geek Repo

Company:University of Colorado Anschutz Medical Campus

Location:Aurora, CO

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NERD-CO

John's starred repositories

sliceTCA_paper

code accompanying Pellegrino*, Stein*, & Cayco-Gajic (2023).

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slicetca

Library to perform Slice Tensor Component Analysis (sliceTCA)

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StableCascade

Official Code for Stable Cascade

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BrainBERT

[ICLR 2023] Code for BrainBERT

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SBCAT-release-NWB

Example code accompanying the Sternberg-CAT data release for Daume et. al. (2024).

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spkit

Signal Processing Toolkit, including ML models with visualization

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GazeReader

A Matlab GLM framework for point process modeling of gaze fixations.

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phycv

PhyCV: The First Physics-inspired Computer Vision Library

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lets-plot

Multiplatform plotting library based on the Grammar of Graphics

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specparam-sbi

Demo on chaining together LFP simulation (neurodsp), spectral parameterization (fooof), and simulation-based inference (sbi).

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3DDFA

The PyTorch improved version of TPAMI 2017 paper: Face Alignment in Full Pose Range: A 3D Total Solution.

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gpt-engineer

Specify what you want it to build, the AI asks for clarification, and then builds it.

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finetune_detr

trying out finetuning detr on small datasets

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ANTsPyNet

Pre-trained models and utilities for deep learning on medical images in Python

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spectral_connectivity

Frequency domain estimation and functional and directed connectivity analysis tools for electrophysiological data

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mtrf_python

Code to accompany "Latent neural dynamics encode temporal context in speech"

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MiDaS

Code for robust monocular depth estimation described in "Ranftl et. al., Towards Robust Monocular Depth Estimation: Mixing Datasets for Zero-shot Cross-dataset Transfer, TPAMI 2022"

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DLC2Kinematics

a module for kinematic analysis of deeplabcut outputs

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CEBRA

Learnable latent embeddings for joint behavioral and neural analysis - Official implementation of CEBRA

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awesome-ggplot2

A curated list of awesome ggplot2 tutorials, packages etc.

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whisper_real_time

Real time transcription with OpenAI Whisper.

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timeseries-clustering-vae

Variational Recurrent Autoencoder for timeseries clustering in pytorch

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OPSCEAhacks

My mods to the USCF OPSCEA project.

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chatgpt-retrieval-plugin

The ChatGPT Retrieval Plugin lets you easily find personal or work documents by asking questions in natural language.

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30-Days-Of-Python

30 days of Python programming challenge is a step-by-step guide to learn the Python programming language in 30 days. This challenge may take more than100 days, follow your own pace. These videos may help too: https://www.youtube.com/channel/UC7PNRuno1rzYPb1xLa4yktw

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community-events

Place where folks can contribute to 🤗 community events

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