mortonjt

songbird

Vanilla regression methods for microbiome differential abundance analysis

language-alignment

ODE2VAE

ODE2VAE: Deep generative second order ODEs with Bayesian neural networks

probable-bug-bytes

Build a Jekyll blog in minutes, without touching the command line.

ad-handbook

Automatic Differentiation Handbook

bioconda-recipes

Conda recipes for the bioconda channel.

cormorant

Codebase for Cormorant Neural Networks

distributed-representations

fairseq

Facebook AI Research Sequence-to-Sequence Toolkit written in Python.

gevers-phylogenetic

luminate

Denoising longitudinal microbiome data.

lung-cancer-network

metaWRAP

MetaWRAP - a flexible pipeline for genome-resolved metagenomic data analysis

metvae

mimix

MIMIX: a Bayesian Mixed-Effects Model for Microbiome Data from Designed Experiments

mmvec

Neural networks for microbe-metabolite interaction analysis

mmvec-feedstock

A conda-smithy repository for mmvec.

onnx2keras

Convert ONNX model graph to Keras model format.

poplar

pytorch2keras

PyTorch to Keras model convertor

q2-dada2

QIIME 2 plugin wrapping DADA2

q2-emperor

q2-sra

qiime2-environment-files

qiime2 environment files for other tools in q2library

Saliva_quantification_study

savethedate

scVI

Deep generative modeling for single-cell transcriptomics

songbird-feedstock

A conda-smithy repository for songbird.

spring_dance_of_victorious_moose

wack-a-mole