mnarayan

mnarayan

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Company:@neuroquant

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bids-standard
neuroquant
ReScience
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TheEtkinLab
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mnarayan's repositories

AFQ-Insight

Statistical learning for AFQ results

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cookiecutter-data-science

A logical, reasonably standardized, but flexible project structure for doing and sharing data science work.

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cookiecutter-shablona

Create cookiecutters from the uwescience/shablona project template

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dPCA

An implementation of demixed Principal Component Analysis (a supervised linear dimensionality reduction technique)

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gfdr

A toolbox of classic and generalized FDR control procedures

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minimal-mistakes

:triangular_ruler: Jekyll theme for building a personal site, blog, project documentation, or portfolio.

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modwt

An efficient modwt wavelets package. This isn't the usual discrete wavelet transform found in, for example, the gsl but an extended set of algorithms designed to overcome some problems with the usual discrete wavelet transform.

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shablona

A template for small scientific python projects

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cookiecutter-mopackage

A cookiecutter project template for simple data analysis packages in Matlab/Octave

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cookiecutter-remarkjs

Cookiecutter template for presentations using remark.js

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cookiecutter-reproducible-science

boilerplate for reproducible and transparent science

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cookiecutter-reveal.js

A cookiecutter template for reveal.js presentations.

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cpac-utils

Utility functions to fetch and organize preprocessed fMRI timeseries

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ddplot

Depth vs. Depth Plots

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ForBES

Generic and efficient MATLAB solver for nonsmooth optimization problems

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gramm

Gramm is a complete data visualization toolbox for Matlab. It provides an easy to use and high-level interface to produce publication-quality plots of complex data with varied statistical visualizations. Gramm is inspired by R's ggplot2 library.

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hugo-paper-now

writing scientific article with hugo (port of PeerJ/paper-now)

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matlab-cliquer

A MATLAB interface to the C program Cliquer: quickly find cliques in graphs.

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metismex

A mex file to use metis in Matlab

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pandoc-journal-templates

Pandoc templates and resources for the major (bio)statistics journals

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paper-now

Create, edit and display a journal article, entirely in GitHub

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pyquic

Python wrapper for QUIC

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rankdist

A python package for statistical inference and comparisons of rankings

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reading

Brief summaries of scientific papers I've read indexed via Github Issues

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remark-boilerplate

A boilerplate to create presentations using remark, Gulp, Stylus and more.

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ReScience-submission

ReScience submission repository

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rs_signal_extract

BIDS App for resting state signal extraction using nilearn.

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singularity-mriqc

Singularity specification for MRIQC

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story

Beautiful responsive Hugo blog theme focused on simplicity and elegance, with many extra features including presentations, math typesetting, music notation, and search.

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