milot-mirdita

SIMD-accelerated library for computing global and X-drop affine gap penalty sequence-to-sequence or sequence-to-profile alignments using an adaptive block-based algorithm.

Language:Jupyter NotebookMIT020

cameo-responder

Language:ShellGPL-3.0030

candle

Minimalist ML framework for Rust

Language:RustApache-2.0010

Candle-ProstT5

Language:Rust000

ColabFold

Making Protein folding accessible to all via Google Colab!

Language:Jupyter NotebookMIT020

CTranslate2

Fast inference engine for Transformer models

Language:C++MIT000

dssp-wasm

DSSP port to WebAssembly

Language:C++GPL-3.0020

Expr-JIT

I named it JIT but it's actually a stack-based bytecode interpreter!

Language:CMIT020

foldcomp

Compressing protein structures effectively with torsion angles

Language:C++GPL-3.0020

foldseek

Foldseek enables fast and sensitive comparisons of large structure sets.

Language:CGPL-3.0020

gemmi

macromolecular crystallography library and utilities

Language:C++MPL-2.0000

horus

HTTP request logger for Golang

Language:GoMIT020

localcolabfold

ColabFold on your local PC

Language:PythonMIT010

MakingPfamSDB

This GitHub repository is for making the Pfam seeds structure database (PfamSDB) by cutting the related full-length structures on their domain borders.

Language:Python010