Manuel Lera-Ramirez's repositories
poster_pombe2023
Poster for pombe Hiroshima meeting
manulera.github.io
personal website
GenestorianLandingPageSource
Source code for Genestorian landing page
linkml-project-cookiecutter
A cookiecutter for linkml projects. An equivalent of `linkml-ws new project-name`.
example_local_python_module_poetry
A minimal example that shows how to install a local module in a poetry project.
genestorian_data_refinement
A project to extract genotype information from lab spreadsheets.
react-tree
A tree building simple SPA
phenomics_paper_HTP2
Second phenomics paper PHAF re-formatting
phenomics_paper_HTP
HTP formatting for submission to PomBase
pro_obo_slim
A repo to generate a pro slim for the OBO phenotype organisation
oak_tutorial
oak tutorial obo academy
ontology-access-kit
Ontology Access Kit: A python library and command line application for working with ontologies
htp_pmid15821139
Scripts to format the data for pombase phaf for PMID:15821139
goslims2gmt_using_ontology
Generates gmt-like files for each go-slim (first and second column go slim name and description, rest of the columns the systematic_ids of associated genes).
UnivarScatter
A univariate scatter plot for matlab
genestorian_promotion_materials
Genestorian promotion materials
obook
OBO Organized Knowledge: Training materials for becoming an OBO engineer
posterBYG2022
a poster for BYG2022
bbop-graph
General purpose (mathematical) graph library in JavaScript.
filter_excel
A simple web page to load a spreadsheet and filter
ontology_viewer
simple ontology viewer
ontology_howto
A website to guide community curators
fypo
Fission Yeast Phenotype Ontology
posterUK-LocalBiocurationConference
A poster for 1st UK-Local Biocuration Conference. Held in EBI Hinxton in May 2022.
discussions_curation
A repository for more broad discussion of curation
genestorian_data_refinement_GSoC
Genestorian data refinement information for possible GSoC2022 applicants
openVectorEditor
Teselagen's Open Source Vector/Plasmid Editor Component
KymoAnalyzer
Program to Analyze kymographs