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Synthetic Biology Data Exchange Group (SynBioDex)

Synthetic Biology Data Exchange Group

SynBioDex

Geek Repo

A group to coordinate the development of standards to facilitate data exchange in synthetic biology

Home Page:www.sbolstandard.org

Github PK Tool:Github PK Tool

Synthetic Biology Data Exchange Group's repositories

libSBOLj

Java Library for Synthetic Biology Open Language (SBOL)

Language:JavaLicense:Apache-2.0Stargazers:37Issues:25Issues:420

pySBOL3

Native python implementation of SBOL 3.0 specification

Language:PythonLicense:MITStargazers:34Issues:15Issues:217

SBOL-visual

The reference implementation of the SBOL Visual standard

Language:HTMLLicense:NOASSERTIONStargazers:31Issues:30Issues:97

pySBOL2

A pure Python implementation of the SBOL standard.

Language:PythonLicense:Apache-2.0Stargazers:20Issues:5Issues:234

tyto

Use ontology terms in your Python application

Language:PythonLicense:Apache-2.0Stargazers:18Issues:9Issues:55

SBOL-specification

The Synthetic Biology Open Language (SBOL)

Language:TeXStargazers:13Issues:23Issues:222

SBOL-utilities

Command-line utilities and scripts for manipulating SBOL data

Language:JavaScriptLicense:MITStargazers:12Issues:11Issues:130

SBOLCanvas

Language:HTMLLicense:Apache-2.0Stargazers:11Issues:26Issues:149

SEPs

SBOL Enhancement Proposals

Language:PythonStargazers:10Issues:18Issues:59

Community-Media

This repository is intended to be a "one stop" location for finding all of the publicly presented papers, posters, and talks that have been given on SBOL.

Language:Jupyter NotebookLicense:CC0-1.0Stargazers:9Issues:17Issues:4

SBOL-Validator

A web application to validate SBOL files

Language:HTMLLicense:Apache-2.0Stargazers:7Issues:11Issues:101

sbol_factory

The SBOLFactory provides a mechanism for automatically generating an interactive, object-oriented API from a declarative data model specification encoded in OWL.

Language:PythonLicense:MITStargazers:5Issues:2Issues:51

SBOLTestSuite

Language:JavaStargazers:5Issues:30Issues:19

Excel-to-SBOL

Language:PythonLicense:BSD-3-ClauseStargazers:4Issues:4Issues:65

sboljs3

A library for the Synthetic Biology Open Language (SBOL) written in TypeScript, for JavaScript/TypeScript applications in the browser or node.js

Language:TypeScriptStargazers:4Issues:2Issues:21

SbolStandardWebsite

Language:TeXLicense:CC0-1.0Stargazers:4Issues:10Issues:107

SBOLExplorer

Language:UnrealScriptLicense:MITStargazers:3Issues:20Issues:57

SBOL-examples

A repository to share/discuss/ask/propose how to represent examples using SBOL and SBOLVisual.

Language:Jupyter NotebookLicense:Apache-2.0Stargazers:2Issues:11Issues:19

SBOL_website

Repository for documenting issues with the SBOL website at http://www.sbolstandard.org/

Stargazers:2Issues:7Issues:128

dnaplotlib2

DNA plotting library for Python

Language:PythonLicense:MITStargazers:1Issues:9Issues:1

Excel-utilities

Language:PythonLicense:BSD-3-ClauseStargazers:1Issues:10Issues:7

libSBOLj3

A Java library for the Synthetic Biology Open Language version 3

Language:JavaLicense:Apache-2.0Stargazers:1Issues:0Issues:0

Xperimental-Data-Connector

XDC uses excel2flapjack and excel2sbol and interlinks the data

Language:PythonLicense:BSD-3-ClauseStargazers:1Issues:0Issues:5

Xperimental-Data-Connector-Server

This runs a submission to flapjack and synbiohub from an excel file

Language:HTMLLicense:BSD-3-ClauseStargazers:0Issues:0Issues:5

.github

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activity-summaries

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Excel-to-Flapjack

Language:Jupyter NotebookStargazers:0Issues:3Issues:6

hugo-blox-builder

Hugo Academic - Theme

License:MITStargazers:0Issues:0Issues:0

Mediadive-link

A way to pull information from https://mediadive.dsmz.de/ into SBOL

Language:PythonStargazers:0Issues:10Issues:0

SBOL-Notebooks

A repository containing Jupyter Notebooks for SBOL 3

Language:Jupyter NotebookStargazers:0Issues:10Issues:0