lzx325's repositories

cDNA_Cupcake

Miscellaneous collection of Python and R scripts for processing Iso-Seq data

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cellBrowser

Python pipeline and Javascript scatter plot library for single-cell datasets, http://cellbrowser.rtfd.org

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CudaJacobi

CUDA implementation of the Jacobi method

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DANN_py3

python 3 pytorch implementation of DANN

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DDC-transfer-learning

A simple implementation of Deep Domain Confusion: Maximizing for Domain Invariance

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deep-transfer-learning

A collection of implementations of deep domain adaptation algorithms

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Graphormer

This is the official implementation for "Do Transformers Really Perform Bad for Graph Representation?".

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HowToTrainYourMAMLPytorch

The original code for the paper "How to train your MAML" along with a replication of the original "Model Agnostic Meta Learning" (MAML) paper in Pytorch.

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linux-shlib-link-samples

A few examples of how to link Linux shared libraries with secondary dependencies

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masif

MaSIF- Molecular surface interaction fingerprints. Geometric deep learning to decipher patterns in molecular surfaces.

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NCRF

Cancer metastasis detection with neural conditional random field (NCRF)

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Pointnet_Pointnet2_pytorch

PointNet and PointNet++ implemented by pytorch (pure python) and on ModelNet, ShapeNet and S3DIS.

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pygcn

Graph Convolutional Networks in PyTorch

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pytorch-seq2seq

Tutorials on implementing a few sequence-to-sequence (seq2seq) models with PyTorch and TorchText.

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reformer-pytorch

Reformer, the efficient Transformer, in Pytorch

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samtools

Tools (written in C using htslib) for manipulating next-generation sequencing data

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scikit-learn

scikit-learn: machine learning in Python

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siamese-pytorch

Implementation of Siamese Networks for image one-shot learning by PyTorch, train and test model on dataset Omniglot

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Sniffles

Structural variation caller using third generation sequencing

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tabnet

PyTorch implementation of TabNet paper : https://arxiv.org/pdf/1908.07442.pdf

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