kzuberi

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Toronto, Canada

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GeneMANIA

Khalid Zuberi's starred repositories

GenomeKit

A Python library for fast and easy access to genomic resources such as sequence, data tracks, and annotations

Language:PythonApache-2.02000

caddy-security

🔐 Authentication, Authorization, and Accounting (AAA) App and Plugin for Caddy v2. 💎 Implements Form-Based, Basic, Local, LDAP, OpenID Connect, OAuth 2.0 (Github, Google, Facebook, Okta, etc.), SAML Authentication. MFA/2FA with App Authenticators and Yubico. 💎 Authorization with JWT/PASETO tokens. 🔐

Language:GoApache-2.0129400

sequence_align

Efficient implementations of Needleman-Wunsch and other sequence alignment algorithms written in Rust with Python bindings via PyO3.

Language:PythonApache-2.05800

awesome-ai-coding

Awesome AI Coding

CC0-1.050200

rust-bio-tools

A set of command line utilities based on Rust-Bio.

Language:RustMIT17800

rust-htslib

This library provides HTSlib bindings and a high level Rust API for reading and writing BAM files.

Language:RustMIT28300

PaperWM

Tiled scrollable window management for Gnome Shell

Language:JavaScriptGPL-3.0273700

LMOps

General technology for enabling AI capabilities w/ LLMs and MLLMs

Language:PythonMIT326800

poly

A Go package for engineering organisms.

Language:GoMIT65700

awesome-cold-showers

For when people get too hyped up about things

NOASSERTION724400

helix

A post-modern modal text editor.

Language:RustMPL-2.03080700

Tiling-Assistant

An extension which adds a Windows-like snap assist to GNOME. It also expands GNOME's 2 column tiling layout.

Language:JavaScriptGPL-2.0108100

fish.vim

Vim configuration for Fish

Language:Vim Script3800

algorithmica

A computer science textbook

Language:Jupyter Notebook315900

prql

PRQL is a modern language for transforming data — a simple, powerful, pipelined SQL replacement

Language:RustApache-2.0954000

biogo

biogo is a bioinformatics library for Go

Language:GoBSD-3-Clause37800

PaperWM

Gnome 40-42 support has been merged upstream, and there is a path forward for merging PRs upstream, so this repo is no longer needed.

Language:JavaScriptGPL-3.06200

alternative-front-ends

Overview of alternative open source front-ends for popular internet platforms (e.g. YouTube, Twitter, etc.)

AGPL-3.0647400

overdrive

Bash script to download mp3s from the OverDrive audiobook service

Language:Shell41800

scientific-visualization-book

An open access book on scientific visualization using python and matplotlib

Language:PythonNOASSERTION1012000

seqkit

A cross-platform and ultrafast toolkit for FASTA/Q file manipulation

Language:GoMIT122700

biowasm

WebAssembly modules for genomics

Language:CMIT19500

eleventy-duo

Eleventy Duo is a minimal and beautiful Eleventy theme for personal blogs.

Language:CSSMIT22500

engineering-blogs

A curated list of engineering blogs

Language:Ruby2963800

mow.cli

A versatile library for building CLI applications in Go

Language:GoMIT87100

gotraining

Go Training Class Material :

Language:GoNOASSERTION1175500

eggos

A Go unikernel running on x86 bare metal

Language:GoMIT220600

duckdb

DuckDB is an analytical in-process SQL database management system

Language:C++MIT1887500

netomaton

Automata on arbitrary networks, with Python

Language:PythonApache-2.04800

cloud-run-faq

Unofficial FAQ and everything you've been wondering about Google Cloud Run.

Language:ShellCC-BY-4.0230400