Kirti Prakash's repositories
cornell-applied-ml
Teaching materials for the applied machine learning course at Cornell Tech (online edition)
diplib
Quantitative Image Analysis in C++, MATLAB and Python
dynamic-visualization-of-high-dimensional-data
Jupyter notebooks and Python scripts associated with experiments and analyses presented in "Dynamic visualization of high-dimensional data" by Sun et al. (2022).
generative-ai-for-beginners
12 Lessons, Get Started Building with Generative AI đź”— https://microsoft.github.io/generative-ai-for-beginners/
HohlbeinLab.github.io
Github Pages
iterative-localization
Software underlying: Precision in iterative modulation enhanced single-molecule localization microscopy
kirtiprakash
Config files for my GitHub profile.
microEye
A python toolkit for fluorescence microscopy.
OpenMicroscopy
Non-comprehensive list of projects and resources related to open microscopy.
prov-gigapath
Prov-GigaPath: A whole-slide foundation model for digital pathology from real-world data
regDeconProject
code of the registration and deconvolution project
RTutor
Chat with your data via AI. http://RTutor.ai
Scientific-Inkscape
Scientific Inkscape: Inkscape extensions for figure resizing and editing
simclr
SimCLRv2 - Big Self-Supervised Models are Strong Semi-Supervised Learners
simnoise
Information driven structured illumination microscopy using noise-controlled image reconstructions
SIMPLI
SIMPLI is a highly configurable pipeline for the analysis of multiplexed imaging data.
SimulateNPCs
Simulate structurally variable Nuclear Pore Complexes
sofipackage
Sofipackage is a Matlab-based software for super-resolution optical fluctuation imaging (SOFI) analysis.
Synplex
Computer simulator of multiplex tissue images from a set of user-defined parameters
teaching
Optics and biophysics teaching materials
the-sourdough-framework
Open source book dedicated to helping you to make the best possible sourdough bread at home.
TrackMate
TrackMate is your buddy for your everyday tracking.