Keith Hughitt's repositories
trump-world
TrumpWorld data exploration (RMarkdown/R/igraph)
Awesome-Bioinformatics
A curated list of awesome Bioinformatics libraries and software.
bioconductor-transcript-length
An exploration of methods for querying transcript length in Bioconductor.
bsci411-co-expression-networks
Lecture of co-expression networks for UMD BSCI411 Fall 2016 course.
presentation-omic-sciences-r-and-bioconductor
Short presentation and demo code for a lecture on R & Bioconductor.
cookiecutter-rmd-data-science
Cookiecutter RMarkdown Data Science Template
data-kind-annie-e-casey-2016
DataKind 2016 Data Dive: Annie E. Casey Foundation
dna-seq-gatk-variant-calling
This Snakemake pipeline implements the GATK best-practices workflow
efficient-columnwise-correlation
Efficient ways to compute Pearson's correlation between columns of two matrices in various scientific computing languages
linear-models-study-group
Study group focused on core concepts related to linear models and GLMs.
Repro_git_vcs_tutorial
A simple tutorial on Git and Github, geared at scientists and reproducible research applications.
rhub-linux-builders
Docker configuration for the R-hub Linux builders
wrangling-genomics
Lesson for wrangling genomics data