Dominik Kutra's repositories
CellProfiler
An open-source application for biological image analysis
cfep
conda-forge's Enhancement Proposal
constructor
tool for creating installers from conda packages
cookiecutter-napari-plugin
Cookiecutter for napari plugins
deedsBCV
new and more efficient version for 3D discrete deformable registration, reaching the highest accuracy in several benchmarks
docker-images
Repository to host the Docker images files used in conda-forge
handwritten-text-recognition-for-apache-mxnet
This repository lets you train neural networks models for performing end-to-end full-page handwriting recognition using the Apache MXNet deep learning frameworks on the IAM Dataset.
ilp-reader
Read ilastik .ilp files
lazyflow
lazy parallel ondemand zero copy numpy array data flows with caching and dirty propagation
lemon-feedstock
A conda-smithy repository for lemon.
manual-ilastik-fiji-plugin-install
manual-ilastik-fiji-plugin-install
napari-feedstock
A conda-smithy repository for napari.
napari-svg-feedstock
A conda-smithy repository for napari-svg.
ndstructs
Utility classes to deal with 5d arrays
nifty
A nifty library for graph based image segmentation.
pyqtgraph
Fast data visualization and GUI tools for scientific / engineering applications
python-ia-embl-2020
Material for the image analysis with python course at EMBL, January 2020
python-novice-inflammation
Software Carpentry introduction to Python for novices using inflammation data.
spec-bioimage-io
Specification for the bioimage.io model description file.
tifffile
Read and write TIFF(r) files. Forked from https://pypi.org/project/tifffile
xtensor-python-cookiecutter
Cookiecutter for a Python project making use of xtensor
z5
Lighweight C++ and Python interface for datasets in zarr and N5 format
z5py-feedstock
A conda-smithy repository for z5py.