Dominik Kutra's repositories
2021-BIAHCS-ilastik-additional-material
BIAHCS course 2021, ilastik module, additional material
bioconda-recipes
Conda recipes for the bioconda channel.
bioimage-io-models
Ilastik models for the bioimage.io model zoo
bioimage-io-models-1
Model repo for bioimage.io
CellProfiler-plugins
Community-contributed and experimental CellProfiler modules.
conda-diff
Command line tool for conda environment comparison
deep-learning-intro
Learn Deep Learning with Python
elf
Utils and convenience functions for large-scale bio-image analysis.
fastfilters
fast gaussian and derivative convolutional filters
ilastik-4ij-reference-macros
Collection of macros with ilastik project files / data
ilastik-pixel-classification-album-solution
album solution to run ilastik pixel classification projects
inferno-feedstock
A conda-smithy repository for inferno.
minio-py
MinIO Client SDK for Python
pandas
Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more
plant-seg
A tool for cell instance aware segmentation in densely packed 3D volumetric images
py-rse
Research Software Engineering with Python course material
pytest-grpc
Allow test gRPC with pytest
pytest-qt
pytest plugin for Qt (PyQt4, PyQt5 and PySide) application testing
python-bioimage-io
Python specific core utilities for interpretation of specification files of the bioimage model zoo
pytorch-bioimage-io
Pytorch specific core utilities for interpretation of specification files of the bioimage model zoo
spec-bioimage-io
Specification for the bioimage.io model description file.
termcolor-feedstock
A conda-smithy repository for termcolor.
xarray
N-D labeled arrays and datasets in Python