Josh Herr's repositories
fasta_utilities
A collection of scripts developed to interact with fasta, fastq and sam/bam files.
jrherr.github.com
Open Notebook
Python_for_Data_Science
A rapid on-ramp primer for programmers who want to learn Python for doing data science research and development.
2014-03-17-purdue
Bootcamp at Purdue University in March 2014
bioinformatics
Tools for bioinformatics
homebrew-cask
a friendly homebrew-style CLI workflow for the administration of Mac applications distributed as binaries
homebrew-science
Scientific formulae for the Homebrew package manager
jekyll-bootstrap
The quickest way to start and publish your Jekyll powered blog. 100% compatible with GitHub pages.
jmpress.js
A jQuery plugin to build a website on the infinite canvas
khmer_diversity
Tools to evaluate the diversity of metagenomics sample
pysam
Pysam is a python module for reading and manipulating Samfiles. It's a lightweight wrapper of the samtools C-API. Pysam also includes an interface for tabix.
startbootstrap
Better HTML Starter Templates for Bootstrap 3
vectoreditor
Web based DNA sequence editing and analysis tool