Josh Herr's repositories
2014-04-29-gwu
Software Carpentry Bootcamp at George Washington University on April 29th-30th 2014
2015-01-27-msu_icer
Software Carpentry Bootcamp held at Michigan State University on January 27th to 29th, 2015
2014-06-26-nd
Software Carpentry Bootcamp on June 26th-27th, 2014, at Notre Dame University
2014-07-10-esip
Software Carpentry Bootcamp on July 10th-11th, 2014, at ESIP meeting in Frisco, CO, USA
2014-07-24-beacon
Data Carpentry workshop July 24-25 BEACON
2014-09-11-udel
Software Carpentry Bootcamp on September 11th-12th, 2014, at the University of Delaware
cloaked-octo-wallhack
This is Josh's working folder for daily progress reports
ConditionallyRareTaxa
R scripts and tutorial datasets to detect conditionally rare taxa in time series of microbial communities
datacarpentry
Data Carpentry workshop materials
datacarpentry.github.io
Website for data carpentry
knowyourdata-genomics
Lesson on Getting to Know Your Data for genomics
makefile-example
An example of a data analysis pipeline using Make
meteor-gazelle
A framework built using Meteor.
mothur_ami
Repository to create and maintain an Amazon AMI for mothur
nanopore-scripts
Various scripts and recipes for working with nanopore data
sql-ecology
Lesson on using the SQL for ecology