Joel Nitta's repositories
docker-packrat-example
Example of installing R packages to a docker image with packrat
ms_template
An example repository for automated rendering of scientific manuscripts
baitfindR_example
Example of how to use baitfindR
canopylife
Life in the canopy: Community trait assessments reveal substantial functional diversity among fern epiphytes
japan_ferns_review
An update and reassessment of fern and lycophyte diversity data in the Japanese Archipelago
2020-09-21-swc
Demo lesson page for teaching software carpentry
baitfindR-docker
Docker image for baitfindR
booklist
R package to maintain a book list with Zotero and Google Sheets
docker-po4a
po4a meets docker as standalone CLI tool
ecostructure
Clustering and Visualization of species abundance patterns in ecological data
ecostructure-docker
Dockerfile for running ecostructure
FSSgam
Code for full subsets model fitting using GA(M)M
gni
A fork of https://github.com/GlobalNamesArchitecture/gni
HybPiper
Recovering genes from targeted sequence capture data
mariadb_docker
Dockerfile for mariadb with R
minimal
minimal R package for testing only
pferns
R package for some custom functions
phyloscripts
Helper scripts for processing and visualization of phylogenetics datasets
po4gitbook
Translation tool for the gitbook. It creates gettext catalog and compile po file to generate translated documents.
swc-trans-2019-12-16
Presentation about translating Software Carpentry curricula into Japanese
swc-trans-2020-11-17
Presentation about Software Carpentry for Iwasaki Lab
t_angustifrons_docker
Dockerfile for the T_angustifrons project