Joel Nitta's repositories
2022-bioCasia_targets
Introduction to BioC Asia and how to use {targets} for effective workflows in R
babelwhale
Talking to Docker and Singularity containers
carpentrycon_2022_trans
Slides for Translation panel at CarpentryCon 2022
shinka_2022
Slides for Japan Evolution conference 2022
carpentrycon_2022_ja
Slides for CarpentryCon 2022 panel on regional communities.
ja_ferns_names
Demo workflow of taxastand to resolve names of Japanese ferns
targets
Function-oriented Make-like declarative workflows for R
ismb_2022
Presentation for ISMB 2022
botany_2022_ftol
Slides for Botany 2022 presentation on the Fern Tree of Life (FTOL)
botany_2022_taxastand
Slides for Botany 2022 presentation on R package taxastand
bioconda-recipes
Conda recipes for the bioconda channel.
Awesome-CV-docker
Dockerized compilation of Awesome-CV-based documents
restez
:sleeping: :open_file_folder: Create and Query a Local Copy of GenBank in R
seimei-gairon-r-intro
Slides for 生命概論 lecture on R
example_rmd
Example Rmarkdown report
mdpo-docker
Docker image for mdpo
asiaR-targets-intro
Introduction to the {targets} R pacakge at Asia-R meetup
targets_gapminder_example
Example data analysis workflow using R targets package
japan_ferns_spatial_phy_cache
Targets data cache for japan_ferns_spatial_phy
readmedown
Rmarkdown for (data) readme files
gameto-barcode-review
Identifying cryptic fern gametophytes using DNA barcoding: A review
gameto_barcode_ifs
Slides for the presentation "DNA Barcoding of Fern Gametophytes: Past, Present, and Future"
styles
Official repository for Citation Style Language (CSL) citation styles.
entap-docker
Docker image for running EnTAP
zotero-better-bibtex
Make Zotero effective for us LaTeX holdouts