jgreener64

Joe Greener's starred repositories

hyperfine

A command-line benchmarking tool

Language:RustApache-2.020851 92 244

tiny-gpu

A minimal GPU design in Verilog to learn how GPUs work from the ground up

Language:SystemVerilog6713 65 22

optax

Optax is a gradient processing and optimization library for JAX.

Language:PythonApache-2.01573 37 225

penzai

A JAX research toolkit for building, editing, and visualizing neural networks.

Language:PythonApache-2.01558 18 12

Triton-Puzzles

Puzzles for learning Triton

Language:Jupyter NotebookApache-2.0871 7 8

RoseTTAFold-All-Atom

Language:PythonNOASSERTION576 9 116

SpeedyWeather.jl

Play atmospheric modelling like it's LEGO.

Language:JuliaMIT405 13 143

rf_diffusion_all_atom

Public RFDiffusionAA repo

Language:PythonNOASSERTION259 7 19

plb2

A programming language benchmark

Language:CCC0-1.0245 8 25

algovivo

An energy-based formulation for soft-bodied virtual creatures

Language:JavaScriptMIT215 4 8

XLB

XLB: Accelerated Lattice Boltzmann (XLB) based on JAX for Physics-based ML

Language:PythonNOASSERTION164 12 11

DifferentiationInterface.jl

An interface to various automatic differentiation backends in Julia.

Language:JuliaMIT148 7 80

cifar10-airbench

94% on CIFAR-10 in 3.29 seconds 💨 96% in 35 seconds

Language:PythonMIT113 20

ShallowWaters.jl

A type-flexible shallow water model that can run with 16-bit arithmetic.

Language:JuliaMIT112 7 13

gpu4pyscf

A plugin to use Nvidia GPU in PySCF package

Language:CudaGPL-3.0106 5 43

julia-gpu-course-2023

GPU Programming with Julia 2023 - course at the Swiss National Supercomputing Centre (CSCS), ETH Zurich

Language:Jupyter NotebookBSD-3-Clause83 20

FASTX.jl

Parse and process FASTA and FASTQ formatted files of biological sequences.

Language:JuliaMIT60 9 47

cache

A shortcut action to cache Julia artifacts, packages, and registries.

Language:JuliaMIT38 6 37

GeometricMachineLearning.jl

Structure Preserving Machine Learning Models in Julia

Language:JuliaMIT38 6 13

Sherlogs.jl

A number format that inspects your code by logging the arithmetic results.

Language:JuliaMIT38 3 5

StochasticRounding.jl

Up or down? Maybe both?

Language:JuliaMIT33 2 27

stormm

Language:C++32 3 1

rna3db

A dataset for training and benchmarking deep learning models for RNA structure prediction

Language:PythonMIT30 3 6

alchemiscale

a high-throughput alchemical free energy execution system for use with HPC, cloud, bare metal, and Folding@Home

Language:PythonMIT22 9 149

KolmogorovArnoldNetworks.jl

KolmogorovArnoldNetworks.jl is a Julia library providing implementations of Kolmogorov-Arnold neural networks

Language:JuliaMIT22 50

libdescriptor

Auto-differentiated descriptors using Enzyme

Language:C++11 2 4

BioJuliaDocs

Language:JuliaMIT5 4 4

Faiss.jl

Wrapper around FAISS library for similarity search

Language:JuliaMIT4 3 1

ASEconvert.jl

Language:JuliaMIT4 2 2

CUDA_P3M

An implementation of the PME in CUDA for the 15-618 final project.

Language:Jupyter NotebookMIT3 20