Jean-Christophe Fillion-Robin's repositories
ExtensionsIndex
Slicer extensions index
DashboardScripts
Collection of dashboard scripts used on `factory` and `factory-south` build machines.
jupyter-notebooks
Collection of random experiments
command
IssueOps commands in GitHub Actions
exosphere
A user-friendly, extensible OpenStack client. This is a mirror. See GitLab for issues and PRs: https://gitlab.com/exosphere/exosphere
idc-index
Python package to search and download data from NCI Imaging Data Commons
Slicer-DTI-ALPS
Slicer Module to calculate the diffusion tensor image analysis along the perivascular space (DTI-ALPS)
Slicer-MusculoskeletalAnalysis
Musculoskeletal Analysis extension for 3D Slicer. Currently has cortical, cancellous, and bone density analysis.
Slicer-SLICSegmentEditorEffect
This 3DSlicer extension is an additional Segment Editor Effect that segments the master volume with the Simple Linear Iterative Clustering (SLIC) algorithm.
Slicer-ThicknessMap
Thickness map generation extension for 3d Slicer
SlicerBatchBrainMRTumorSegmentation
It is a wrapper to BratsToolKit to perform brain tumor segmentation for a number of patients.
SlicerDentureRegistration
This is an extension module to realize the registration of patients' CT images and the corresponding denture models.
SlicerDiffusionComplexityMap
Slice module to offer the Diffusion Complexity Map algorithm
SlicerFractionalMyocardialMass
Repository for calculating the fractional myocardial mass and the myocardial mass at risk
SlicerIGSpineDeformity
This Module is designed for spine deformity analysis using freehand 3D ultrasound imaging, and the first module Lamina Landmark Labeling help find the Spinal Cord curve in 3D, which can be projected to three anatomical planes, e.g., for Scoliosis analysis using the Cobb angle when projected to the front back view.
SlicerMSLesionVisualiser
A Slicer 3D extension to visualise multiple sclerosis lesions.
SlicerPACSConnector
The PACS Connector extension enables querying your local or remote PACS from a clear and easily accessible interface within 3D Slicer and offers new filter parameters.
SlicerQuickModelAlign
3DSlicer QuickAlign is a software module that allows quick alignment and visual & metric comparison of two 3D models.
SlicerSegmentHumanBody
3D Slicer extension for SegmentAnyBone developed by Mazurowski Lab
SlicerTrack
Module for 3D Slicer providing tracking tools and displacement visualizations
SlicerTractParcellation
Automatic parcellation of white matter tractography using WMA method and ORG atlas