isinaltinkaya

gptchatteR

An experimental and unofficial wrapper for interacting with OpenAI GPT models in R.

vcfgl

Genotype likelihood simulator for VCF/BCF files

best-free-resources

Best resources (websites, youtube channels, videos, notes etc.) I use for learning awesome stuff!

actg-lock

An i3lock lockscreen template. When you lock your screen, you can see the DNA sequence flowing in the matrix way.

cheatsheets

i3gcalendar

A script to see the closest event in your Google Calendar on your i3blocks bar.

WPSG2022

adv_binf_2021_week1

Teaching material used in the "Advanced Bioinformatics for Next-Generation Sequencing" class, University of Copenhagen, 2021

bash-functions

Time saver automatization functions to add your bashrc

bash-script-generator

Generate bash scripts with pre-written header and open with vim to start coding immediately.

Copenhagen-Popgen-Course

Teaching materials for Copenhagen course in high throughput sequencing data for population genetics

CSwR22_Group2

Repository for the presentation of CSwR 2022 class group 2.

CV

Isin Altinkaya's Curriculum Vitae.

DataScienceCourse

gitgpt

Make ChatGPT write commit messages for you

ngsAMOVA

Tool for performing AMOVA, Dxy and neighbor joining trees with NGS data

popgen2022

angsd-troubleshooting-guide

bioconda-recipes

Conda recipes for the bioconda channel.

CSwR

Computational Statistics with R

decluster_paper_scripts

Pipeline and code snippets used in decluster paper analyses

google-slides_scripts

because why not

HLA

xHLA: Fast and accurate HLA typing from short read sequence data

IBD_benchmark

isinaltinkaya

isinaltinkaya.github.io

ISSUE_TEMPLATE

PopGenForensicAnalysis22

My notes and scripts for the course Population Genetics and Forensic Analysis 2022, University of Copenhagen.

R_collection

Some potentially useful R functions, codes, tips, and tricks. Feel free to use!

vcfgl_benchmarking