Beast code in Giters

Daniel Danis's repositories

A deep learning-based tool to identify splice variants

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Conversion from Synthea CSV to OMOP CDM

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Count number of motifs in all transcripts of the human genome

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Example of nextflow pipeline

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:page_with_curl: Data Carpentry Python lessons on ecology.

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Introduction to Machine learning with Python, 4h interactive workshop

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Reference implementation of selected algorithms for my most urgent needs

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Rendering of the workshop-template site

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Annotation of VCF variants with functional impact and from databases (executable+library)

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Select a few genes from Jannovar database and serialize them in order to get small database suitable for unit testing.

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Calculate splice donor and acceptor scores for all exons of the genome

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Spring Boot app with some useful libraries for bioinformatics

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Monarch web application and API

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