huhlim

multiflow

alphaflow

AlphaFold Meets Flow Matching for Generating Protein Ensembles

AF_Cluster

Predict multiple protein conformations using sequence clustering and AlphaFold2.

AFProfile

Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile

protein-frame-flow

Fast protein backbone generation with SE(3) flow matching.

ColabDesign

Making Protein Design accessible to all via Google Colab!

GeoLDM

Geometric Latent Diffusion Models for 3D Molecule Generation

open-interpreter

A natural language interface for computers

ShortGPT

🚀🎬 ShortGPT - Experimental AI framework for youtube shorts / tiktok channel automation

solvent

OpenChat

LLMs custom-chatbots console ⚡

cg2all

Convert coarse-grained protein structure to all-atom model

simple-diffusion

Demo of diffusion models #DDPM applied to molecular dynamics of small peptide

FastChat

An open platform for training, serving, and evaluating large language models. Release repo for Vicuna and Chatbot Arena.

chameleon-llm

Codes for "Chameleon: Plug-and-Play Compositional Reasoning with Large Language Models".

PyTorch-VAE

A Collection of Variational Autoencoders (VAE) in PyTorch.

vmtouch

Portable file system cache diagnostics and control

torchdiffeq

Differentiable ODE solvers with full GPU support and O(1)-memory backpropagation.

torchsde

Differentiable SDE solvers with GPU support and efficient sensitivity analysis.

diffusers

🤗 Diffusers: State-of-the-art diffusion models for image and audio generation in PyTorch and FLAX.

RFdiffusion

Code for running RFdiffusion

llama-dl

High-speed download of LLaMA, Facebook's 65B parameter GPT model

se3_diffusion

Implementation for SE(3) diffusion model with application to protein backbone generation

GearNet

GearNet and Geometric Pretraining Methods for Protein Structure Representation Learning, ICLR'2023 (https://arxiv.org/abs/2203.06125)

jax2torch

Use Jax functions in Pytorch

foldingdiff

Diffusion models of protein structure; trigonometry and attention are all you need!

ScoreDiffusionModel

The Pytorch Tutorial of Score-based and Diffusion Model

DeepLearningExamples

State-of-the-Art Deep Learning scripts organized by models - easy to train and deploy with reproducible accuracy and performance on enterprise-grade infrastructure.

DDPM_REMD

Denoising diffusion probabilistic models for replica exchange

nequip

NequIP is a code for building E(3)-equivariant interatomic potentials