Beast code in Giters

Lim Heo's repositories

alphafold-multistate

Language:Python29 5 8

cg2all

Convert coarse-grained protein structure to all-atom model

Language:PythonApache-2.029 3 12

alphafold

Open source code for AlphaFold.

Language:PythonApache-2.0100

e3nn_practice

Language:Python1 10

SE3Transformer

Language:PythonMIT1 10

alphaflow

AlphaFold Meets Flow Matching for Generating Protein Ensembles

Language:PythonMIT000

casp13_analysis

Language:Python010

cg2all.devel

Conversion of Coarse-grained models to All-atom models

Language:PythonApache-2.001 5

ColabDesign

Making Protein Design accessible to all via Google Colab!

Language:Python000

deepmind-research

This repository contains implementations and illustrative code to accompany DeepMind publications

Language:Jupyter NotebookApache-2.0000

egnn

Language:PythonMIT000

odorant_receptors

Language:HTMLApache-2.0010

environments

Language:Vim Script010

esm

Evolutionary Scale Modeling (esm): Pretrained language models for proteins

Language:PythonMIT000

esmfold.train

Trainable ESMFold

Language:PythonMIT010

H-REMD

Hamiltonian and Temperature Replica Exchange Molecular Dynamics simulation using OpenMM

Language:Python010

KGBpotential

Language:ShellGPL-3.0010

LoopModeling

Language:FortranGPL-3.0010

mdtraj

An open library for the analysis of molecular dynamics trajectories

Language:CLGPL-2.1000

nequip

NequIP is a code for building E(3)-equivariant interatomic potentials

Language:PythonMIT000

openfold

Trainable PyTorch reproduction of AlphaFold 2

Language:PythonApache-2.0000

WEsampler

Language:Rich Text FormatGPL-3.0010