Hervé Ménager's repositories
workflow-is-galaxy-hall
Miscelaneous material and documentation about the workflow IS Galaxy side of things.
bioconda-recipes
Conda recipes for the bioconda channel.
bioconda.github.io
Bioconda is a distribution of bioinformatics software realized as a channel for the versatile package manager Conda.
BioHackathon-projects-2019
This repository is meant for the participants of the BioHackathon hosted in Paris in Nov 2019 to share ideas, create issues, manage projects, publish materials, create code, etc.
BioHackEU23_preprint
Template for the report on project 32 from the BioHackathon Europe 2023 event - Barcelona, November 2023
caseologue
Validation tools for the EDAM ontology
connexion
Swagger/OpenAPI First framework for Python on top of Flask with automatic endpoint validation & OAuth2 support
content
Experimental repo of bio.tools content for augmentation with other sources of tool information
cwltool
Common Workflow Language reference implementation
dabeplech
Light library to perform request to different APIs
documentation
Sphinx-based documentation for the Open Babel project
edu-1
BioContainers Documentation.
galaxy
Fork of Galaxy (http://galaxyproject.org/) attempting to implement the CWL spec.
galaxy-hub
Galaxy Community Hub
hackathon-marseille
GREEKC hackathon training event
R-Shiny_training_2019-07
Formation R-Shiny, Pasteur, 9-10 juillet 2019
robot
ROBOT is an OBO Tool
standards
Documentation for standards and best practices from the Galaxy IUC
swot
Identify email addresses or domains names that belong to colleges or universities. Help automate the process of approving or rejecting academic discounts.
TESTAPI
TESTAPI
workflow-is-cwl
This repository contains CWL descriptions of the various tools which will allow you to build workflows for the annotation of transcripts