C3BI-pasteur-fr

ngphylogeny-django

UTechSCB-SCHNAPPs

Shiny app for the analysis of single cell data

ReGaTE

Registration of Galaxy Tools in Elixir

SCHNAPPsContributions

some contributions to the scShinyHub project

ngphylogeny-galaxy

Galaxy tools and workflows used in NGPhylogeny.fr

BeadArrayCNV

CoreGeneBuilder

CoreGeneBuilder can be used to extract a core genome or a persistent genome from a given set of bacterial genomes

eFASTA

eFASTA: extracting nucleotide segments from FASTA file

igv-webapp

IGV Web App

common-workflow-language

Repository for CWL Specfications

craw

Counter RNA seq Window (CRAW) compute and visualize the coverage of RNA seq experiment.

cwltool

Common Workflow Language reference implementation

FragmentAnalyser

galaxy

Data intensive science for everyone.

galaxy_base_conf

IPGalaxy basic configuration

Galaxy_training_material

IFB-BioShadock

host Dockerfiles for Bioshadock

IFB-playbook

store playbook to build IFB appliances

python-course-1

python course of E2I2B

python-solutions-1

solutions of the E2I2B python courses exercises

Salmonella-CRISPR-Typing

taxo_pack

Analyze and visualize the taxonomic abundance of set of sequences

taxo_rrna

Creation of taxonomy Berleley DB for Silva and Greengenes 16S databases

taxodb_ncbi

NCBI Taxonomy Database formater

Tempora

Pathway-based trajectory inference method for time-series scRNAseq data

TemporaFork

test

test

toil

A scalable, efficient, cross-platform and easy-to-use workflow engine in pure Python

training-material

A collection of training material from offered Galaxy courses

workflows

Community maintained workflows & tools (with examples)