Mike Smith (grimbough)

grimbough

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Home Page:msmith.de

Twitter:@grimbough

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Mike Smith's repositories

rhdf5

Package providing an interface between HDF5 and R

FITfileR

R package for reading data from FIT files using only native R code, rather than relying on external libraries.

biomaRt

R package providing query functionality to BioMart instances like Ensembl

Rarr

A simple native R reader for Zarr Arrays

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bioc-actions

GitHub Actions for developing and maintaining Bioconductor packages

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Rhdf5lib

Distribution of the HDF5 library in an R package

rhdf5filters

Distributing additional HDF5 compression filters as an R package. Intended to be used with rhdf5, however the compiled filters can also be used with external applications.

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code.bioconductor.org

Tools for browsing the Bioconductor code repository

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anaconda-download-stats

Process and host download statistics for Anaconda packages

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bioc-testing-with-arm64

Tools for testing Bioconductor packages on Linux ARM64

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AnnotationForge

Tools for building SQLite-based annotation data packages

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biocblog

A Quarto blog for Bioconductor community

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BiocStyle

Issues and pull requests for BiocStyle should go here.

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DelayedMatrixStats

A port of the matrixStats API to work with DelayedMatrix objects from the DelayedArray package

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EvaluatingWhatWorks2023

For bookdown project on Evaluating What Works

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glmSparseNet

An R :package: for network-based and sparse generalized linear models (GLM)

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gscreend

Phenotype detection in pooled genetic perturbation screens

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Huber-group-EMBL.github.io

Huber group public webpage

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MuData

MuData-compatible storage for bioconductor's MultiAssayExperiment

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statistical_inferences

Repository for the textbook 'Improving Your Statistical Inferences' by Daniel Lakens

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