Frederick Boehm's repositories
qtl2pleio-manuscript-chtc
High-throughput computing resources for "Testing pleiotropy vs. separate QTL in multiparental populations" manuscript
qtl2pleio-manuscript-clean
Materials for testing pleiotropy manuscript
chapter1
materials for chapter 1 of my thesis
combee-march-2019
slides for combee presentation of March 8, 2019 at 3pm
data-carpentry-genomics-boehm
teaching materials for Data Carpentry genomics two-day workshop
diss-latex
latex dissertation
heatmaply
Interactive Heat Maps for R Using plotly
holepunch
Make your R project Binder ready
iheatmapr
Complex, interactive heatmaps in R
imgc2018-poster-latex2
poster presented at imgc2018 meeting in Puerto Rico, November 2018. http://imgs.org/?run=conference.imgc2018
imgc2018poster
materials for International Mammalian Genetics Conference 2018
intermediate
small R utility for mediation analysis
keller-2018-chr19-power
materials for study of power in test of pleiotropy v separate QTL with Keller 2018 data
keller-2018-rna-analysis
Contains code and materials for analysis of five hotspots in DO mice, first reported in Keller et al 2018 GENETICS
keller-hotspots
analyzing hotspots from keller et al 2018 data
keller2018-chr2-hotspot-chtc
files for use on CHTC Condor to analyze Keller 2018 chromosome 2 hotspot
pkgdown
Generate static html documentation for an R package
qtl2chtc
helper functions for working with outputs from CHTC
qtl2extra
Extra functions to complement qtl2 R package
qtl2pleio-manuscript
Resources from the qtl2pleio manuscript, "Testing pleiotropy vs. separate QTL in multiparental populations"
QTLfigs
Code for QTL mapping related figures/illustrations
ucsd-march-2019
presentation slides for Palmer lab meeting, March 6, 2019
website-mediumish
mediumish Hugo website