fboehm

gemma2

Zhou & Stephens (2014) GEMMA multivariate linear mixed model

qtl2pleio

Testing pleiotropy vs. separate QTL in multiparental populations

qtlbim

QTL Bayesian Interval Mapping

qtl2hotspots

Code for analysis of Keller et al. 2018 expression hotspots

administration

ai-class

AI Math Class at UMass Amherst, fall 2020 & spring 2021

bioassays

boehm

My useful functions

ccbehar

qtl mapping for sam behar and rocky lai

cirtl2020

materials for teaching "Teaching statistics" for CIRTL in Summer 2020

covid19

Materials for a J. Statistics Education piece related to covid19 data

DetectorChecker

Project to develop software to assess developing detector screen damage (Web App based on the original DetectorChecker package)

ethics-class

homeworks

homeworks and exercises for independent studies

jse-2019

materials for a Journal of Statistics Education manuscript

macrophage

materials for macrophage project

mapping

Quantitative Trait Mapping Lesson

mmdproject

Math 679 project repo for Spring 2021 term

neuro

neurogenetics & QTL mapping with reduced models

osca

Materials written while studying Orchestrating single cell analysis with Bioconductor: https://osca.bioconductor.org/

PAPER_backwarddesign

Statistics Education Research Journal special issue submission

PAPER_reducedmodels_DO_CC

QRADMM

R package for penalized quantile regression with ADMM

qtl2

QTL analysis software for high-dimensional data and complex cross designs

qtl2mediation

rdataretriever

R interface to the Data Retriever

reducedscan

methods for modeling fewer than 8 alleles in, eg, DO and CC mice

regens

shinyplots

stack-overflow

attempts at answering stack overflow questions