Frederick Boehm's starred repositories
FriendsDontLetFriends
Friends don't let friends make certain types of data visualization - What are they and why are they bad.
Mastering-GitHub-Copilot-for-Paired-Programming
An 8 Lesson course teaching everything you need to know about harnessing GitHub Copilot and an AI Paired Programing resource.
PythonNumericalDemos
Well-documented Python demonstrations for spatial data analytics, geostatistical and machine learning to support my courses.
Large-Language-Model-Notebooks-Course
Practical course about Large Language Models.
pandocfilters
A python module for writing pandoc filters, with a collection of examples
BI-BE-CS-183-2023
Introduction to Computational Biology and Bioinformatics Course at Caltech, 2023
assertthat
User friendly assertions for R
MoMAColors
Color Schemes based around artwork and the Museum of Modern Art.
graphml-class
Full Stack Graph Machine Learning: Theory, Practice, Tools and Techniques
Practical-Guide-to-Applied-Conformal-Prediction-in-R
Supplemental R Examples on Applied Conformal Prediction. These examples follow Practical Guide to Applied Conformal Prediction in Python, but for R.
easyTrackHubs
This package provides a function to reformat lists of genome coverage files, such as bigWig of bam files, into the directory structure of a UCSC Track Hub ready to be visualized in the genome browser. For details about it's use, please have a look at the vignette of the package.
conformal_sim
simulations to measure interval coverage
quarto-rladies-cologne
Hello, Quarto: A World of Possibilities (for Reproducible Publishing) talk for R-Ladies Cologne
FABInference
FAB p-values and confidence intervals
shiny-quarto
Quarto extension for building Shiny apps
academyDatasets
Datasets for RStudio Academy
paper-infer
Inference with LDpred2-auto
snakemake_tutorial
An one hour quick start guide to Snakemake
BiocAlphaMissense
Elementary interfaces to AlphaMissense resources, using BiocFileCache, Rsamtools, GenomicRanges