Farhad's repositories
16S-rRNA-amplicon
Analysis of (gut) microbiome in Qiime2 and R.
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bcftools
This is the official development repository for BCFtools. See installation instructions and other documentation here http://samtools.github.io/bcftools/howtos/install.html
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MAC2023.github.io
Microbiome Analysis Course
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ONT_helper
A workflow with a set of tools for whole genome assembly and visulaizaiotn of Oxfort Nanopore Technology sequencing reads
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Shinny-network-R
A function to create association network for microbiome data: bacteria-bacteria and feature-metabolite association.
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Shotgun-metagenomics
Shotgun metagenomics analysis of gut microbiome and functional profile
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