Logan Dowdle's repositories
meica_tool
Useful for making plots from MEICA
2018_multiband_talk
Examples from Nuts and Bolts Multiband Talk
advanced_fMRI_course
List of practicals used for the fMRI data analysis course of UoB (UK) between 2014 and 2017
antsInstallExample
Simple bash script that downloads and installs ANTs in a unix environment
bids-b0-tools
Scripts, tools, and documents on creating, parsing, and working with BIDS-structured data sets.
bids2nda
A conversion tool for creating NDA compatible metadata representation from BIDS datasets.
Bios8366
Advanced Statistical Computing at Vanderbilt University's Department of Biostatistics
bspm
Utility MATLAB functions and wrappers for fMRI data analysis, mostly based in SPM12
convert-eprime
Python functions to convert E-Prime files to csvs. Not currently being developed, but issues and PRs welcome!
face_morpher
:angel: Morph faces with Python, Numpy, Scipy
GLMsingle
A toolbox for accurate single-trial estimates in fMRI time-series data
LAYNII
Stand alone fMRI software suite for layer-fMRI analyses.
nda-tools
Python package for interacting with NDA web services. Used to validate, submit, and download data to and from NDA.
NORDIC_Raw
Matlab code for performing image reconstruction in MRI and performing the NORDIC denoising
osmnx-examples
Examples demonstrating the usage of OSMnx
PREPAIR
PREPAIR is an unsupervised physiological noise correction method using magnitude and phase data instead of external recordings to identify physiological fluctuations in the brain..
PreSurgMapp
PreSurgMapp is a user-friendly, open souce, MATLAB toolbox for pipelined data processing with a dedicated design for individualized presurgical mapping of eloquent functional areas based on multimodal functional MRI.
pycortex
Pycortex is a python-based toolkit for surface visualization of fMRI data
statistical-parametric-helper
Matlab code to make subject batch processing, artifact removal and other tedious jobs in SPM (Statistical Parametric Mapping) much, much easier.
TDM
Temporal Decomposition through Manifold Fitting