Giovanni Dall'Olio's repositories
peb_unix_intro
Materials for the Unix Intro workshop at the Programming for Evolutionary Course in Leipzig
keras-workshop
Data and scripts for keras course
sparklyr.nested
A sparklyr extension for nested data
biodatahackathon2018
Wellcome Trust Genome Campus hackathon 2018
ensembl-vep
The Variant Effect Predictor predicts the functional effects of genomic variants
HBGDki-London
Healthy Birth, Growth & Development knowledge
homebrew-science
:microscope: Scientific formulae for the Homebrew package manager
ASCIIGenome
Text Only Genome Viewer!
drake
Data workflow tool, like a "Make for data"
linuxbrew
:skull: This repository is defunct, because it has been split into https://github.com/Linuxbrew/brew and https://github.com/Linuxbrew/homebrew-core
multidplyr
Partitioned data frames for 'dplyr'
data.table
R's data.table package extends data.frame. More info:
essentiality_characterization
Characterization of properties of Essential/Core Fitness genes detected by Hart, 2015
clusterProfiler
statistical analysis and visulization of functional profiles for genes and gene clusters
DOSE
Disease Ontology Semantic and Enrichment analysis
biostar-tutorials
Code for biostar tutorials - mostly R and Perl
rigraph
igraph R package
My-Help-At-Home
Code and data from the July DataDive 2015
enrichment4GTEx_clusterProfiler
reproduce the functional enrichment analysis presented in GTEx paper using clusterProfiler/DOSE
rentrez
talk with NCBI entrez using R