calvinmccarter

FLAb

Fitness landscapes for antibodies

cleanrl

High-quality single file implementation of Deep Reinforcement Learning algorithms with research-friendly features (PPO, DQN, C51, DDPG, TD3, SAC, PPG)

BALM-paper

EsmTherm

HotProtein

[ICLR 2023] "HotProtein: A Novel Framework for Protein Thermostability Prediction and Editing" by Tianlong Chen*, Chengyue Gong*, Daniel Jesus Diaz, Xuxi Chen, Jordan Tyler Wells, Qiang Liu, Zhangyang Wang, Andrew Ellington, Alex Dimakis, Adam Klivans

DeepSCM

A convolutional neural network model to predict spatial charge map (SCM) score, a molecular dynamics simulation-based model to predict antibody viscosity.

NeurIPS2020

Supplementary files for paper accepted to NeurIPS 2020. Title: Robustly Correcting Sampling Bias using Cumulative Distribution Functions

vision_transformer

Discover how to build vision transformer from scratch with this comprehensive tutorial. Follow our step-by-step guide to create your own vision transformer.

genedisco

GeneDisco is a benchmark suite for evaluating active learning algorithms for experimental design in drug discovery.

MinsePIE

Modelling insertion efficiency for Prime Insertion Experiments

nestedcv_experiments

Numerical experiments for nested cross-validation paper

chat-gpt-jupyter-extension

A browser extension that lets you chat with ChatGPT from any local Jupyter notebook.

llm-classifier

Classify data instantly using an LLM

private-gpt

Interact with your documents using the power of GPT, 100% privately, no data leaks

JointMDS

Official implementation of Joint Multidimensional Scaling

vecmap

A framework to learn cross-lingual word embedding mappings

MUSE

A library for Multilingual Unsupervised or Supervised word Embeddings

vanGAN

GANs for unsupervised bilingual induction task

VennABERS

Fast implementation of Venn-ABERS probabilistic predictors

FKSUM

Fast Kernel Smoothing in R

polyexpkde

Fast univariate kernel density estimation with the polynomial-exponential kernel

kditransform

Kernel density integral transformation: feature preprocessing and univariate clustering

img2vec

:fire: Use pre-trained models in PyTorch to extract vector embeddings for any image

anonymous_github

Anonymous Github is a proxy server to support anonymous browsing of Github repositories for open-science code and data.

differentiable_quantile_transform

Quantile transform that is differentiable for PyTorch

early-stopping-pytorch

Early stopping for PyTorch

rhl-algs

Experiments for Human in Reinforcement Learning

SmallDataBenchmarks

Small Dataset Benchmarks on the Dataset of Datasets UCI++

vector-quantize-pytorch

Vector (and Scalar) Quantization, in Pytorch

SPTAG

A distributed approximate nearest neighborhood search (ANN) library which provides a high quality vector index build, search and distributed online serving toolkits for large scale vector search scenario.