Calvin McCarter (calvinmccarter)

calvinmccarter

Geek Repo

Company:BigHat Biosciences

Location:Boston, MA

Home Page:http://calvinmccarter.com/

Twitter:@CalvinMcCarter

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Calvin McCarter's repositories

condo-adapter

Confounded Domain Adapter

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kditransform

Kernel density integral transformation: feature preprocessing and univariate clustering

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maddness-old

Code for ICML2020 submission

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polyexpkde

Fast univariate kernel density estimation with the polynomial-exponential kernel

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azimuth

General-purpose PKI on Ethereum

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BLISS

Large Scale Search Index

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bolt

10-100x faster matrix and vector operations.

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deit

Official DeiT repository

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building-better-benchmarks-blog

Code accompanying our blog post on building better benchmarks for ADME optimization

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Explainable-Deep-Autoencoder

Explainable autoencoder deciphering key pathways underlying cancer expression patterns

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ForestDiffusion

Generating and Imputing Tabular Data via Diffusion and Flow XGBoost Models

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idw-attention

Inverse distance-weighted attention learns prototypes in a single-hidden-layer network trained with vanilla cross-entropy loss.

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JointMDS

Official implementation of Joint Multidimensional Scaling

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just-large-models

Just large language models. Hackable, with as little abstraction as possible. Done for my own purposes, feel free to rip.

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mixers

MLP-Mixer and ConvMixer with SAM

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MLP-Mixer

PyTorch implementation of MLP-Mixer architecture.

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nanopq

Pure python implementation of product quantization for nearest neighbor search

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otalign

Gromov-Wasserstein Alignment of Embeddings

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pyComBat

pyComBat is a Python 3 implementation of ComBat, one of the most widely used tool for correcting technical biases, called batch effects, in microarray expression data.

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pytorch-minimize

Newton and Quasi-Newton optimization with PyTorch

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sklearn-lvq

sklearn compatible implementation of generalized vector quantization algorithms

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SmallDataBenchmarks

Small Dataset Benchmarks on the Dataset of Datasets UCI++

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TabPFN

Official implementation of the TabPFN paper (https://arxiv.org/abs/2207.01848) and the tabpfn package.

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tinyknn

A tiny approximate K-Nearest Neighbour library in Python based on Fast Product Quantization and IVF

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