Aziz Khan's repositories
QDNAseq.hg38
QDNAseq bin annotation for hg38
format-free-journals
List of journals which allow format-free initial submissions
bios259-w24
Course material for BIOS259: The Art of Reproducible Science - A Hands-on Approach
2024-04-25-rutgers
Genomics Carpentries Workshop at Rutgers University, April 25-26, 2024
2024-05-31-stanford-online
https://asntech.github.io/2024-05-31-stanford-online
AmpliconClassifier
Classify output of AmpliconArchitect to detect types of focal amplifications present
bioconda-recipes
Conda recipes for the bioconda channel.
cloud-genomics
Introduction to Cloud Computing for Genomics
datacarpentry.github.io
Data Carpentry website
ECRCentral
A central platform for early career researchers
facets-suite
Utility functions for FACETS
iC10TrainingData
iC10TrainingData — Training Datasets for iC10 Package
ith.Variant
pipeline for calling somatic variants from multi-sampled genomic sequencing data
OptiType
Precision HLA typing from next-generation sequencing data
organization-genomics
Project Organization and Management for Genomics
semester-biology
Forkable teaching materials for course on working with data in R
staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
wrangling-genomics
Data Wrangling and Processing for Genomics