asntech

intervene

Intervene: a tool for intersection and visualization of multiple genomic region and gene sets

pyjaspar

pyJASPAR: A Pythonic interface to JASPAR transcription factor motifs

QDNAseq.hg38

QDNAseq bin annotation for hg38

format-free-journals

List of journals which allow format-free initial submissions

asntech.github.io

Personal website code using HUGO

jaspar

Source code for JASPAR web portal and REST API

UniBind

UniBind is a comprehensive database of transcription factor binding sites predicted through uniform processing of thousands of ChIP-seq datasets

bios259-w24

Course material for BIOS259: The Art of Reproducible Science - A Hands-on Approach

2024-04-25-rutgers

Genomics Carpentries Workshop at Rutgers University, April 25-26, 2024

AmpliconClassifier

Classify output of AmpliconArchitect to detect types of focal amplifications present

asntech

bioconda-recipes

Conda recipes for the bioconda channel.

biopython

Official git repository for Biopython (originally converted from CVS)

DAS_Meta-analysis

dbsuper

ECRCentral

A central platform for early career researchers

facets-suite

Utility functions for FACETS

iC10

:exclamation: This is a read-only mirror of the CRAN R package repository. iC10 — A Copy Number and Expression-Based Classifier for Breast Tumours

iC10TrainingData

iC10TrainingData — Training Datasets for iC10 Package

inclusive-science

A call to eradicate non-inclusive terms from the life sciences and beyond

ith.Variant

pipeline for calling somatic variants from multi-sampled genomic sequencing data

OptiType

Precision HLA typing from next-generation sequencing data

organization-genomics

Project Organization and Management for Genomics

resources

Documentation and tutorials worth sharing.

scg-compute-cost-monitor

ShatterSeek

staged-recipes

A place to submit conda recipes before they become fully fledged conda-forge feedstocks

stjudecab.github.io

Official website for St. Jude CAB

workflows

Community maintained workflows & tools (with examples)

wrangling-genomics

Data Wrangling and Processing for Genomics