ar0ch

AmnesiaTheDarkDescent

aroonchan.de

https://aroonchan.de

bioconda-recipes

Conda recipes for the bioconda channel.

cookiecutter-flask-restful

Flask cookiecutter template for builing APIs with flask-restful, including JWT auth, cli, tests, swagger, docker and more

covid-19-event-risk-planner

Charts that estimate collective risk that large events will have one (or more) COVID-19 positive individuals.

covid19-event-risk-planner

COVID19 risk planner R-Shiny application

cv

Latex markup for my CV: https://aroonchande.com/cv

docker-ubuntu-vnc-desktop

Docker image to provide HTML5 VNC interface to access Ubuntu LXDE and LXQT desktop environment

dotfiles

kui's dotfiles and scripts

eggnog-mapper

Fast genome-wide functional annotation through orthology assignment

examples

Simple guided examples of how to use Caddy

gitignore

A collection of useful .gitignore templates

gwas-ui

html-to-svg

svg screenshot of web pages (saves the given URL to an SVG file)

kounta

🧮 🔢 Generate multi-sample k-mer count matrix from WGS

lyve-SET

LYVE-SET, a method of using hqSNPs to create a phylogeny, especially for outbreak investigations

mic_prediction

Code for doing MIC predictions on genomes

NASP

Northern Arizona SNP Pipeline

nord-putty

An arctic, north-bluish clean and elegant PuTTY color theme.

pip

The PyPA recommended tool for installing Python packages

proteinatlas_pathology_api

API for reannotated HPA data

proteinatlas_pathology_processor

Automated ingesting and reannotation and quantification of HPA pathology images

RampDB

repo-analytics.github.io

Thorough analytics for your GitHub repos

SCOP

sever

🔪Good-looking problems: customise your Shiny disconnected screen and error messages

shinypanels

Collapsible panels layout for r shiny apps

stringMLST

Fast k-mer based tool for multi locus sequence typing (MLST)

TreeToReads

Pipeline to generate NGS reads from a phylogeny

vcflib

a simple C++ library for parsing and manipulating VCF files, + many command-line utilities