Andrés Pérez-Figueroa's repositories
anpefi.github.io
my personal website at
actionsTest
Test for actions
anpefi.source
Source files for the website in anpefi.github.io
Bison2012
Code and config files for the simulations performed in the 2012 Biol Cons paper: http://dx.doi.org/10.1016/j.biocon.2012.02.022
MIBM-Genomica-Marina
Repo (In Spanish) for the Master Course: Genomica Marina
Vilas_et_al.15
Scripts and parameter files for the simulation analyses showed in the paper: Vilas et al. (2015), http://dx.doi.org/10.1111/mec.13334
agalma-modules
My own collection of agalma modules. Agalma (https://bitbucket.org/caseywdunn/agalma) is a set of analysis pipelines for phylogenomic analyses developed by the Dunn Lab at Brown University.
bioinf-python
Python for Bioinformatics
datasciencecoursera
Repo for the Coursera's specialization on Data Science
datasharing
The Leek group guide to data sharing
ddp-w4-project
repo for the Peer-graded Assignment: Course Project: Shiny Application and Reproducible Pitch
ExData_Plotting1
Plotting Assignment 1 for Exploratory Data Analysis
misc-R-tools
Repository for multiple and miscellaneous tools and scripts in R
pandoc-templates
Templates for pandoc
quantiself
A lifelogging project
RepData_PeerAssessment1
Peer Assessment 1 for Reproducible Research
rtumopp
🦀 R interface to tumopp. This fork is my own copy to use igraph instead of igraphlite, as this was giving me installation problems
sc-mtDNA
Reproducible reports for the paper entittled: Single-cell mtDNA heteroplasmy in colorectal cancer
shinymanager
Simple and secure authentification mechanism for single shiny applications.
slides-seminar-IBMsims
This is a slide presentation I give as a lab seminar about Individual Based Simulations in population genetics and Cancer (22/04/2016). Written in Markdown using reveal-ck framework