Al-Hashimi Lab (alhashimilab)

alhashimilab

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Company:Duke University

Location:Duke University Medical Center

Home Page:https://sites.duke.edu/alhashimilab/

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Al-Hashimi Lab's repositories

Ensemble

All experimentally determined dynamic ensembles from Al-Hashimi lab

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RDC

All NMR RDCs used for determination of ensemble

RNA-DNA-Hybrids

G-T/U mismatch dynamics in RNA-DNA hybrids

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BMNS

Bloch-McConnell Numerical Simulation - Fitting and Plotting

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CanonicalBP

A comprehensive PDB database of canonical WC base pair in DNA and RNA

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Disprun

Disprun3 - 1D R1rho peak fitting, error estimation, experimental setup program

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HoogsteenInTheData

all the DNA structural models rebuilt and refined with Hoogsteen bps from Al-Hashimi lab

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InteractiveProfiles

Interactive profiles for NMR peak lineshape and RD (R1rho) profiles

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Kinetically_resolved_ensemble_TAR

Data / Analysis for paper on kinetically resolved ensemble for TAR

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MismatchPDB

A comprehensive PDB database of all DNA/RNA base pairs

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PySAS

Python script of sample and select for ensemble determination

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RNAJunction

A comprehensive PDB database of 2-way junction inter-helical angles.

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Singly_HB_AU

PDB survey for Singly H-bond AU bps in the PDB

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TAR_ES2_ensemble

Open source resources / raw data for manuscript : An RNA excited conformational state at atomic resolution

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