Beast code in Giters

Zilong-Li's repositories

org-tufte

Export org file to beautiful Tufte html

Language:Emacs Lisp69 2 4

PCAone

Ultra-Fast Principal Component Analysis All in One

Language:C++GPL-3.028 6 5

vcfpp

a C++ API of htslib to be easily integrated and safely used. More importantly, it can be callled seamlessly in R/Python/Julia etc.

Language:C++MIT21 20

BioScripts

Cool Bioinformatics Scripts

Language:PythonGPL-3.011 30

vcfppR

vcfpp.h + htslib + Rcpp = fast VCF/BCF https://doi.org/10.1093/bioinformatics/btae049

Language:CNOASSERTION8 2 1

BaseVarC

The repo was not under development. Check out angsd toolkit for low depth data analyses.

Language:C++GPL-3.07 3 7

lcWGS-imputation-workflow

Imputation workflow for low coverage whole genome sequencing data

Language:PythonMIT7 20

PCAoneR

Language:C++GPL-3.04 30

array-imputation-workflow

imputation workflow for array data using shapeit2 and impute2

Language:PythonMIT2 10

phaseless

Imputation and Admixture for lcWGS in one goal

Language:C++GPL-3.01 20

SeqLib

C++ htslib interface for manipulating sequence data and VCF

Language:C++NOASSERTION000

bgen

fast bgen parser for python

Language:C++MIT000

bioconda-recipes

Conda recipes for the bioconda channel.

Language:ShellMIT020

Papers

Language:RGPL-3.0000

random

Language:R000

STITCH

STITCH - Sequencing To Imputation Through Constructing Haplotypes

Language:RGPL-3.0000

Syllable-PBWT

Language:C++000

vim-auto-popmenu

:sunglasses: Display the Completion Menu Automantically (next AutoComplPop) !!

Language:Vim scriptMIT020

vim-dict

add my dict for completion in vim

Language:Vim script020