YongxinLiu

Yong-Xin Liu's repositories

MicrobiomeStatPlot

Interpretation and visualization of microbiome charts

Language:HTMLGPL-3.0322 24 4

QIIME2ChineseManual

QIIME 2中文文档(QIIME 2 Chinese Manual)

Language:HTML258 10 1

EasyAmplicon

Easy Amplicon data analysis pipeline

Language:HTMLNOASSERTION217 4 14

EasyMetagenome

Easy Metagenome Pipeline

Language:HTMLGPL-3.0197 10 8

Note

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Metagenome

Metagenome analysis pipeline

Language:Shell85 60

EasyMicrobiome

Language:CGPL-3.076 4 2

MicrobiomeProtocol

Microbiome Protocol eBook related documents and scripts.

Language:HTML41 5 1

Liu2020ProteinCell

Pipeline & Reproducible analysis examples for amplicon and metagenome in microbiome

Language:ShellGPL-3.034 3 1

Zhang2018SCLS

Rice (Oryza Sative) root microbiome time-course analysis. (Zhang2018SCLS)

Language:RGPL-3.032 8 1

Zhang2019NBT

Scripts for stat and plot figures in rice microbiome paper

Language:HTML27 30

Amplicon2017

Data and scripts for amplicon pipeline

Language:HTMLGPL-3.025 30

Culturome

Language:HTML23 50

UsearchChineseManual

USEARCH中文帮助文档(USEARCH Chinese manual)

GPL-3.019 20

Amplicon2022

High throughput sequencing -- Amplicon sequencing, mainly include 16S, 18S and ITS for microbiome analysis

Language:ShellGPL-3.015 40

RiceMinicoreSL

Language:HTMLGPL-3.0500

Huang2019SCIENCE

Scripts for Arabidopsis triterpene

Language:HTMLGPL-3.04 30

Chen2019SCLS

Arabidopsis Sesterterpene Modulate Root Microbiota related data and scripts

Language:RGPL-3.03 40

WheatFHB

Wheat perithecia 16S amplicon

Language:HTMLGPL-3.03 30

amplicon

Statistics and visualization for amplicon data

Language:RGPL-2.02 10

Work

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Qian2020CMJ

Scripts for Chinese Medical Journal

Language:RGPL-3.01 30

EasyNanoMeta

A pipeline for nanopore long-read metagenomic analysis.

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fastp

An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

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HostPurge

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