WenchaoLin

assemblyStatistics

A simple program for evaluate the assembly of a give genome.

chrVis

a chromosome visualization tool

Fapiao2Excel

把发票金额提取出来保存到Excel中用于报销和统计

arkShellGenome

Scripts used in chromosome-level genome assembly of ark shell

biflow

bioinformatics-workbook

ChatCODE

Bioinformatics scripts generated by openai ChatGPT

covidcg

A COVID-19 CoV Genetics (CG) browser to inform therapeutics development

djBlast

A standalone WWW BLAST framework for flexible queries on sequence database.

fastxCropper

Crop or trim reads in fastq(a) format.

flarepoint-crm

Flarepoint is a free, open-source and self-hosted CRM platform based of Laravel 5

Fruit-Recognition

基于tensorflow的水果识别小程序，前端采用uni-app框架，后端采用django框架部署在阿里云服务器上。

HpcGridRunner

source code for HpcGridRunner

in_silico_pcr

Perl script for simulating PCR reactions. Extract sequences from a query based on primer sequences.

inventory-management

This is a inventory management system

jqvmap

jQuery Vector Map Library

magpipe

miniprot

Align proteins to genomes with splicing and frameshift

NanoPlot

Plotting scripts for long read sequencing data

nullarbor

:floppy_disk: :page_with_curl: "Reads to report" for public health and clinical microbiology

orange3

🍊 :bar_chart: :bulb: Orange: Interactive data analysis

pathogenie

Desktop tool for microbial genome annotation and gene detection

pb-16S-nf

Nextflow pipeline to analyze PacBio HiFi full-length 16S data

Perfect-bacterial-genome-tutorial

PhyloSuite

PhyloSuite is an integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogenetics studies

pinax-news

a simple app for publishing links to news articles on your site

refinery-platform

The Refinery Platform is a data management, analysis and visualization system for bioinformatics and computational biology applications. The platforms consists of three major components: a data repository with rich metadata capabilities, a workflow engine based on the popular Galaxy system, and visualization tools to support the exploration and interpretation of results at all stages of the analysis process.

RNAseq_with_Hisat2_stringtie

RNAseq analysis with Hisat2, stringtie, and ballgown

superbug

Drug resistance gene database

WenchaoLin

Config files for my GitHub profile.