The Jackson Laboratory's repositories
activelearning
Active learning tools for fine-tuning ML models
geneweaver-api
A system for the integration and analysis of heterogeneous functional genomics data.
geneweaver-db
The GeneWeaver database interaction code.
geneweaver-client
A client library for the integration and analysis of heterogeneous functional genomics data.
geneweaver-aon
Ortholog/homolog mapping for Geneweaver
geneweaver-core
The core library for GeneWeaver projects.
geneweaver-docs
Documentation site for the Geneweaver project.
ontology-annotation-network
A rest-api to serve a neo4j database of supported ontology annotations.
SnipScripts
This is where all scripts demonstrated by our TechSnips contributors will be provided free of charge.
DccXmlGenerator
This is the Python version of the DCC XML file generator.
dask_relabeling
A relabeling tool for tiled segmentation with Dask
ontology-service
A generic ontology term microservice
zarrdataset
A dataset for loading zarr files to be used in machine learning training pipelines
cs-nf-pipelines
The Jackson Laboratory Computational Sciences Nextflow based analysis pipelines
scbl-utils
A set of command-line utilities that facilitates data processing in the Single Cell Biology Lab at the Jackson Laboratory.
intro-napari-workshop
Intro to napari Workshop
intro-napari-slides
Introductory slideshow to napari
dti_motion
software for detection and removal of motion frames in DTI MRI scans
Galaxy_Tools_CBA
This is the Python and config files for the CBA tools deployed in Galaxy