SainsburyWellcomeCentre

NeuralPlayground

The standardised environment for the hippocampus and entorhinal cortex models

lasagna

3-D imaging visualisation through slicing

Pyper

Motion Tracking

neuro

Visualisation and analysis of brain imaging data

ara_tools

Analysis of mouse brain STP data with respect to the Allen Reference Atlas

crabs-exploration

A toolkit for detecting and tracking crabs in the field.

WAZP

Wasp Animal-tracking Zoo project with Pose estimation

microharp

A Harp protocol and device application framework micropython package.

aeon_acquisition

Task control and acquisition systems for Project Aeon.

aeon_mecha

Project Aeon's main library for interfacing with acquired data. Contains modules for raw data file io, data querying, data processing, data qc, database ingestion, and building computational data pipelines.

aeon_blog

Project Aeon's "meta" repo that details the project, with a focus on dev practices and notes on technology review, challenges and insights.

aeon_experiments

Experiment workflows for Project Aeon

AnimalTrackingPipelines

rc2_matlab

software-skills

Software skills training at the Sainsbury Wellcome Centre & Gatsby Computational Neuroscience Unit

swc-computing

Community driven guides to solving computational problems at SWC/GCNU

aeon_docs

Online docs repo for Project Aeon.

looming_spots

micropython

MicroPython - a lean and efficient Python implementation for microcontrollers and constrained systems

rc2_analysis

aeon_analysis

Data Analysis code for Project Aeon

aeon_feeder

aeon_feeder_fix

aeon_lineardrive

A linear stage controller for moving the position of a commutator

element-array-ephys

DataJoint Element for Extracellular Array Electrophysiology - NIH U24

lenzietal2022_lse_figures

OpenSerialSection

Open Serial Section Imaging @ SWC

pmt_controller

socket-feeder

Wireless feeder controller

spikeGUI