RGLab / ggcyto

Visualize Cytometry data with ggplot2

RGLab/ggcyto Issues

Issues with x-axis not showing 0 at the origin
Updated 4 months ago
Defining ggcyto aesthetics when calling ggcyto within a custom function.
Closed 4 months ago1
autoplot() fails with error indicating call to guides() is broken
Closed 5 months ago7
fill by variable does not work with ggcyto
Updated a year ago2
`ggcyto::axis_*_inverse_trans`: `minor_breaks` howto?
Updated a year ago1
axis_x_inverse_trans overlapping text around 0
Updated 2 years ago3
scale_x_logicle() not converging anymore
Updated 2 years ago22
Colour issue with autoplot
Updated 2 years ago2
speed up 2d autoplot
Closed 2 years ago3
set the default limits to the actual data range
Closed 2 years ago4
No free scales using facet_wrap
Closed 2 years ago5
max_nrow_to_plot does not work in combination with marginalFilter
Closed 2 years ago
Overlays of gated populations from one fcs file
Closed 2 years ago
as.ggplot does not work for ggcyto_GatingLayout objects resulting from autoplot
Closed 4 years ago3
Feature request: patchwork support
Updated 2 years ago1
geom_overlay - legend labels + stacked overlays
Updated 2 years ago1
ggcyto fill and legend behavior dysfunctional
Updated 2 years ago
Legends and histogram fill behavior with altered limits
Updated 2 years ago
How to export light plots with ggcyto ?
Updated 2 years ago1
Where does ggcyto get facet labels when plotting a multi-sample gatingSet object?
Closed 3 years ago1
Howto recreate FACDiva's data range?
Updated 3 years ago
ggcyto 1.19.0: Attempt to plot crashes R
Closed 3 years ago1
Facet ordering in ggcyto
Closed 3 years ago2
Question regarding limits
Closed 3 years ago2
geom_stats static location
Updated 4 years ago16
autoplot() plots come out warped and cutoff
Closed 4 years ago2
ggcyto vs FlowJo axis transformation
Closed 4 years ago10
autoplot currently doesn't work for boolean gate
Closed 4 years ago2
ggsave does not work for ggcyto_GatingLayout objects resulting from autoplot
Closed 4 years ago2
Howto color points by gate memership?
Closed 4 years ago3
geom_stats positioning beyond 'adjust'?
Closed 4 years ago6
option to change and/or remove stats from autoplot
Closed 4 years ago10
Basic 'ggcyto' plot drop "NA" when labelling "DNA" channels
Closed 4 years ago1
Error: object 'update_theme' not found
Closed 4 years ago3
ggcyto cannot run on gatingset class object with version (3.3) of ggplot2 on R 3.6.3
Closed 4 years ago6
Allow plotting of gates without data
Updated 4 years ago
Values in x axis disappear when using scale_x_flowjo_fasinh()
Updated 4 years ago1
Unexpected faceting in geom_overlay() - Overlaying 1D plots
Closed 4 years ago2
Improving autoplot behavior and error messages
Updated 5 years ago
Axis ranges for autoplot of subpopulation added by gs_pop_add are incorrect
Closed 5 years ago3
generate non-binned dot plot when bins=0
Closed 5 years ago1
max_nrow_to_plot not working on flowFrames
Closed 5 years ago1
no such file or directory: '"/usr/local/lib/R/3.6/site-library/Rhdf5lib/lib/libhdf5.a"'
Closed 5 years ago6
scale_y_flowCore_fasinh does not work with hexagonal binning
Closed 5 years ago5
True zero on axis
Updated 5 years ago5
Bug? Unexpected faceting in `geom_overlay`
Closed 5 years ago2
Newbie: Can't reproduce FacsDiva Output
Closed 5 years ago3
Error: polygon edge not found
Updated 5 years ago14
Gates not correct with multiple samples
Closed 6 years ago6
geom_hex() bins stretched out along FSC-A for some data
Closed 6 years ago2