RGLab / ggcyto

Visualize Cytometry data with ggplot2

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Bug? Unexpected faceting in `geom_overlay`

r-cheologist opened this issue · comments

Have a look at this:

library(ggcyto)
dataDir <- system.file("extdata",package="flowWorkspaceData")
gs <- load_gs(list.files(dataDir, pattern = "gs_manual",full = TRUE))
p <- autoplot(gs, "CD3+")

p +
  geom_overlay(data = "DPT" , size = 0.3, alpha = 0.7, color = "red") +
  geom_overlay(data = "DNT", size = 0.3, alpha = 0.7, color = "blue")

Ok. This is apparently dpendent on the data set ... can't reproduce. Closing.

You need to install flowWorkspaceData bioconductor package